R packages

• metacal. https://github.com/mikemc/metacal https://mikemc.github.io/metacal/

• speedyseq. https://github.com/mikemc/speedyseq

Microbiome analysis > reproducible workflows

• https://github.com/rthanis/animal-cdiff
• https://github.com/mikemc/mgs-bias-manuscript

Evolutionary dynamics > analysis and simulations

• https://github.com/mikemc/valley-crossing-subdivided